YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109082705
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGALKSLLI LGRWCPGLGV APQARSLAAV VPGVTQIDNK SDFLQKRPHR QHPGILNLPH  60
   61 VRLPQALANG AQLLLLENAG PTMENQVQTL TSYLWSRHLP VEPEELQRRA RHFEKKFLEN 120
  121 PDLCQTEEKL RGAVLHALRK TTYHWQELSY TEGLSLVYMA ARLDGGFAAV SRAFHEIRAR 180
  181 NPAFQPQTLM DFGSGTGSVT WAANSIWGQS LREYMCVDKS TAMLALAEKL LKGGSESGEP 240
  241 YIPGVFFRQF LPVSPKVQFD VVVSAFSLSE LPSRADRTEV VQTLWRKTGH FLVLVENGTK 300
  301 AGHRLLMEAR DLVLKGKEKS PLDPRPSFVF APCPHELPCP QLTTSRPLAC SFSQAYHPIP 360
  361 FRWNKKPKEE KFSMVILARG SPEEANRWPR ITQPVLRRPR HVHCHLCCPD GHMQHAVITA 420
  421 RRHGRDLYRC ARVSSWGDLL PVLTPSAFPP STAQDPSES

Type	Start	End	Confidence
Signal Peptide	1	28	0.90
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	459	0.99