YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109082355
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVSLSVLLG GRVCAAVARC GFATRGVAGP GPIGREPDPD SDWEPEEREL QEVESTLKGQ  60
   61 KKAIRFQKIR RQMEAPGAPP RTLTREAMEQ IRYLREEFPE SWSVPRLAEG FNVSTDVIRR 120
  121 VLRSKFVPTL EQKLKQDQKV LKKAGLAHSL QQLRGAGNTS KLLPAGHSVS GSLLMPGHEA 180
  181 SSKDANHSTA LKVIESDTHR TNTPRRWKGR NKEIQHLEES FVPVAVPLGH PRELQKYSSD 240
  241 SESTRRTGSG ALPSDQKLEE LKAEEPGNFS SKVVQRGREF FDSNGNFLYR I

Type	Start	End	Confidence
Signal Peptide	1	15	0.97
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	291	0.99