YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109082324
Protein type:	Transmembrane
Type Confidence:	0.91
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDAFIRFTNQ TQGRDRLFRA TQYTCMLLRY LLEPKAGKKK VVMKLKKLES SVSTGRKWFR  60
   61 LGNVVHAIQA TEQSIHATDL VPRLCLTLAN LNRVIYFICD TILWVRSVGL TSGINKEKWR 120
  121 TRAAHHYCFS LLLSLVRDLY EISLQMKRVT RDRAKKEKSA SQDSLGYSVA DEETEWLQSF 180
  181 LLLLFRSLKQ HPPLLLDTVK NLCDILNPLD QLGIYKSNPG IIGLGGLVSS IAGMITVAYP 240
  241 QMKLKTR

Type	Start	End	Confidence
Non-Cytoplasmic	1	219	0.81
Transmembrane Helix	220	239	0.88
Cytoplasmic	240	247	0.67