YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109082282
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAPVRRTLL GVAGSWRRLE RLWAGSLSFR SLALAAAPSR NGSPWRLLGA LCLQRPALVS  60
   61 KPLTPLQEEM ASLLQQIEIE RSVYSDHELR ALDENQRLAK KKADLYDEQD EQDILLVQDL 120
  121 EDMWEQTFLQ FKLGARITEA DEKNDRTSLN RKLDRNLVLL VREKLGDQDV WILPQAEWQP 180
  181 GETLRGTAER TLATLSENNM EAKFLGNAPC GHYKFKFPQA VQTESNLGAK VFFFKALLLT 240
  241 GDFSQAGNKG HHVWVTKDEL GDYLKPKYLA QVRRFLSDL

Type	Start	End	Confidence
Signal Peptide	1	35	0.91
N-region	1	26
H-region	27	32
C-region	33	35
Cleavage Site	35	36
Non-Cytoplasmic	36	279	0.99