YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109082238
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLPSSLGDS KQRKEQKEKR REKKRGSSQI TKIQHEYLED RLLGAFRVIE DLLLLPITSY  60
   61 IEKLKEKLRS GAGGGDRARP CQLPPRKRKC KHCGVLSSVS PTRAPVVPPA GHRAICPAGV 120
  121 LLAVPAMLSL DFLDDVRRMN KRQLYYQVLN FGMIVSSALM IWKGLMVITG SESPIVVVLS 180
  181 GSMEPAFHRG DLLFLTNRVE DPIRVGEIVV FRIEGREIPI VHRVLKIHEK QNGHIKFLTK 240
  241 GDNNAVDDRG LYKQGQHWLE KKDVVGRARG FVPYIGIVTI LMNDYPKFKY AVLFLLGLFV 300
  301 LVHRE

Type	Start	End	Confidence
Cytoplasmic	1	143	0.64
Transmembrane Helix	144	166	0.77
Non-Cytoplasmic	167	305	0.71