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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109081435
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRSSLHAAA VLLLVILKEQ PSSPAPANGS KWTYLGPDGE NSWSKKYPSC GGLLQSPIDL  60
   61 HSDILQYDAS LMPLEFQGYN LSANEQFLLT NNGHSVKLNL PSDMHIQGLQ SRYSATQLHL 120
  121 HWGNPNDPHG SEHTVSGQHF AAELHIVHYN SDLYPDASTA SNKSEGLAVL AVLIEMGPFN 180
  181 PSYDKIFSHL QHVKYKGQEA FIPGFNIEEL LPERTAEYYR YRGSLTTPPC NPTVLWTVFR 240
  241 NPVQISQEQL LALETALYCT HMDDPSPREM INNFRQVQKF DERLVYTSFS QVQAYTAAGL 300
  301 SLGIILSLAL AGVLGICIVM AVSIWLFRRK SIKKGDNKGV IYKPAIKEET EAHA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle