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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109081233
Protein type: Globular with Signal Peptide
Type Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLWGSAAARP SFLQPPGGAL RSSSGVVVLL FTGAWQEAQA GLRVTACTAA PSRSPPAGCR  60
   61 RLRAGCCFYK RRHWRPSCDR RHWGSQHNWA EVALPLQRSS GVVRLLGWGC SGGDLTPGVS 120
  121 GRTGDLLGPC ASPQSRRPEL APGASGPVVL QPPNPVCYTE LRANSGRADG LGHPPSFTGQ 180
  181 ALRCWSVWTD ENPYESSENG TVLMEETAYP ALEETSSTIE AEEEKIPEDG IYIGTASDDS 240
  241 DIVTLEPPKL EEIGNQEVVI VEEAQSSEDF NMGSSSSSQY TFCQPETVFS SQPSDDESSS 300
  301 DETSNQPSPA FRRRRARKKT VSTSESEDRL VAEQETEPSK ELSKRQFSSG LNKCVILALV 360
  361 IAISMGFGHF YGTIQIQKRQ QLVRKIHEDE LNDMKDYLSQ CQQEQESFID YKSLKENLAR 420
  421 CWTLTEAEKM SFETQKMNLA TENQYLRISL EKEEKALSSL QEELNKLREQ IRILEDKGTS 480
  481 TELVRENQKL KQHLEEEKQK KHSFLSQRET LLAEAKMLKR ELERERLVTT ALRGELQQLS 540
  541 GSQLHGKSDS PNVYTEKKEI AVLRERLSEL ERKLTFEQQR SDLWERLYVE AKDQSGKQET 600
  601 DGKKKGGRGN HRAKNKSKET FLGSVKETFD AMKNSTKEFV RHHKEKIKQA KEAVKENLKK 660
  661 FSDSVKSTFR HFKDTTKNIF DEKGNKRFGA TKEAAEKART VFSDYLHPQY KAPTDNHHNR 720
  721 GPTMQNDGRK EKPVHFKEFR KNTNSKKCSP GHDCRDNSYS FRKACSGVFD CAQQESMSLF 780
  781 NTVVNPIRMD EFRQIIQRYM LKELDTFCHW NELDQFINKF FLNGVFIHDR KLFTDFVNDV 840
  841 KDYLRNMKEY QVDNDGVFEK LDEYIYRHFF GHTFSPPYGP SRPDKKQRMV NIENSRHRKQ 900
  901 EQKHLQPQPY KREGKWHKYG RTNGRQMANL EIELGQLPFD PKY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle