YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109081025
Protein type:	Globular with Signal Peptide
Type Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLLCPRPAL CYHFLTSLLR SAMQNARGAR QRAEAAGLSG PGPPLGRAAQ HGTPWRLSSA  60
   61 GSLSRGCRGA STAGAAGWKG ELPKPGGCPA PGQETPAISP SKRPRPAEEG GMQLRFARLS 120
  121 DHATAPTRGS ARAAGYDLYS AYDYTIPPME KALVKTDIQI ALPSGCYGRV APRSGLAAKY 180
  181 FIDVGAGVID EDYRGNVGVV LFNFGKEKFE VKKGDRIAQL ICERIFYPEI EEVQALDDTE 240
  241 RGSGGFGSTG KN

Type	Start	End	Confidence
Signal Peptide	1	28	0.83
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	252	0.99