YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109080777
Protein type:	Globular with Signal Peptide
Type Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGVDARLGT RNRLLVTGLA PSLVPRPSQP LRNLWSACLD EGKWGPAEAV EVSLTGVGWG  60
   61 QEKPPFALGS AWQGLWNLAC RVARSGRGGN TRAGKQAEAS GGPRGPSPLP GGRGRAPNRG 120
  121 LQGASRQLLL IGGHGGHGRG APGLAPPVAR ARVTGLPAVR RSPDARKAGV GAQPRATKWE 180
  181 PGRDARTMPY LLISTQIRME VGPTMVGDEQ SDPELMQHLG ASKRSVLGNN FYEYYVNDPP 240
  241 RIVLDKLERR GFRVLSMTGV GQTLVWCLHK E

Type	Start	End	Confidence
Signal Peptide	1	30	0.65
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	271	0.98