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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109080731
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGRLCVGRA AAAAAAAVAV PLAGGQEGSP GGGRRGSRGT TMVKKRKGRV VIDSDTEDSG  60
   61 SDENLDQELL SLAKRKRSDS EEKEPPVSQP AASSDSETSD SDDEWTFGSN KNKKKGKARK 120
  121 IEKKGTMKKQ ANKTASSGSS DKDSSAESSA PEEGEVSDSD SNSSSSSSDS DSSSEDEEFH 180
  181 DGYGEDLMGD EEDRARLEQM TEKEREQELF NRIEKREVLK RRFEIKKKLK TAKKKEKKEK 240
  241 KKKQEEEQEK KKLTQIQESQ VTSHNKERRS KRDEKLDKKS QAMEELKAER EKRKNRTAEL 300
  301 LAKKQPLKTS EVYSDDEEEE EDDKSSEKSD RSSRTSSSDE EEEKEEIPPK SQPVSLPEEL 360
  361 NRVRLSRHKL ERWCHMPFFA KTVTGCFVRI GIGNHNSKPV YRVAEITGVV ETAKVYQLGG 420
  421 TRTNKGLQLR HGNDQRVFRL EFVSNQEFTE SEFMKWKEAM FSAGMQLPTL DEINKKELSI 480
  481 KEALNYKFND QDIEEIVKEK ERFRKAPPNY AMKKTQLLKE KAMAEDLGDQ DKAKQIQDQL 540
  541 NELEERAEAL DRQRTKNISA ISYINQRNRE WNIVESEKAL VAESHNMKNQ QMDPFTRRQC 600
  601 KPTIVSNSRD PAVQAAILAQ LNAKYGSGVL PDAPKEMSKG QGKDKDLNSK SASDLSEDLF 660
  661 KVHDFDVKID LQVPSSESKA LAITSKAPPA KDGAPRRSLN LEDYKKRRGL I

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle