YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109079837
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATPGPVIPE VPFEPSKPPV IEGLSPTVYR DPETFKEKFL RKTRENPVVP IGCLATVAAL  60
   61 TYGVYSFYRG DSRRSQLMMR TRIAAQGFTV TALLLGLAVT AMKSRP

Type	Start	End	Confidence
Cytoplasmic	1	47	0.86
Transmembrane Helix	48	66	0.84
Non-Cytoplasmic	67	82	0.66
Transmembrane Helix	83	102	0.94
Cytoplasmic	103	106	0.67