YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109078314
Protein type:	Globular with Signal Peptide
Type Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSCFRLLSR HISPSLASLR PLRRCFALPL RWAPGRRPSD PRPIAPRRTL TAAASSGDPT  60
   61 CPAAGSSRVR QNFHPDSEAA INRQINLELY ASYVYLSMAY YFSRDDVALN NFARYFLHQS 120
  121 REETEHAEKL MRLQNQRGGR ICLQDIKKPD QDDWKSGLHA MECALLLEKN VNQSLLELHT 180
  181 LASDKGDPHL CDFLETYYLN EQVKSIKELG DHVHNLVKLG APDAGLAEYL FDIHSLGNEN 240
  241 KQN

Type	Start	End	Confidence
Signal Peptide	1	27	0.77
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	243	0.94