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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109078303
Protein type: Globular with Signal Peptide
Type Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSPLRFDGR VVLVTGAGAG LGRAYALAFA ERGALVVVND LGGDFKGVGK GSLAADKVVE  60
   61 EIRRRGGKAV ASYDSVEEGE KVVKTALDAF GRIDVVVNNA GILRDRSFAR ISDEDWDIIH 120
  121 RVHLRGSFQV TRAAWDHMKK QKYGRIIMTS SASGIYGNFG QANYSAAKLG LLGLANSLAI 180
  181 EGRKSNIHCN TIAPNAGSRM TQTVMPEDLV EALKPEYVAP LVLWLCHESC EENGGLFEVG 240
  241 AGWIGKLRWE RTLGAIVRQK NHPMTPEAVK ANWKKICDFE NASKPQSIQE STGSIIEVLS 300
  301 KIDSEGVSAN HTSHATSTAT SGFAGAIGQK LPPFSYAYTE LEAIMYALGV GASIKDPKDL 360
  361 KFVYEGSSDF SCLPTFGVII GQKSLMGGGL AEIPGLSINF AKVIGEPSMK AEKPLKRVGK 420
  421 LKCEAVVADV LDKGSGVVII MDVYSYSEKE LICHNQFSLF LVGSGGFGGK RTSDKVKVAV 480
  481 AIPNRPPDAV LTDTTSLNQA ALYRLSGDWN PLHIDPNFAS LAGFDKPILH GLCTFGFSAR 540
  541 RILQQFADND VSRFKAIKAR FAKPVYPGQT LQTEMWKEGN RIHFQTKVQE TGDIVISNAY 600
  601 VDLAPTSDTS AKTPSEGGKL QSTLVFEEIG RRLKDVGPEV VKKVNAVFEW HITKGGNIGA 660
  661 KWTIDLKSGS GKVYQGPAKG AADTTIILSD EDFMEVVLGK LDPQKAFFSG RLKARGNIML 720
  721 SQKLQMILKD YAKL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle