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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109077858
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLININSILW MCSTLIATHA LHKVKVGKSP PLRGSLSGKV SLPCHFSTMP TLPPSYNTSE  60
   61 FLRIKWSKIE VDKNGKDLKE TTVLVAQNGN IKIGQDYKGR VSVPTHPEAV GDASLTVVKL 120
  121 LASDAGLYRC DVMYGIDDTQ DTVSLAVDGV VFHYRASTSR YTLNFEAAQK ACLDIGAVIA 180
  181 TPEQLFAAYE DGFEQCDAGW LADQTVRYPI RAPRVGCYGD MMGKAGVRTY GFRSPQETYD 240
  241 VYCYVDHLDG DVFHLTAPSK FTFEEAAKEC ENQDARLATV GELQAAWRNG FDQCDYGWLS 300
  301 DASVRHPVTV ARAQCGGGLL GVRTLYRFEN QTGFPPPDSR FDAYCFKRRM SDLSVIGHPI 360
  361 DSESKEDEPC SEETDPVHDL MAEILPEFPD IIEIDLYHSE ENEEEEEEEC ANATDVTTTP 420
  421 SVQYINGKHL VTTVPKDPEA AEARRGQFES VAPSQNFSDS SESDTRPFVI AETELSTAVQ 480
  481 PNGSTETTES LEITWKPETY PETSEHFSGG EPDVFPTVPF HEEFESGTAI KGAESVTERV 540
  541 TEVGHQAHEH IETVSLFPEE SSGEIAIDQE SQKIAFARPT EVTFGEEVEK STSVTYTPTV 600
  601 VPSSASAYVS EEKAVTLIGN LWPDDLLSTK ESWVEATPRQ VVELSGSSSI PVTEGSGEAE 660
  661 EDEDTMFTIV TDLSQRNTTD TLITLDTSRI ITESFFEVPA TTIYSVSEQP SAKVVPTKFV 720
  721 SETDTSEWIS STSAEEEKRK EEEGTTGTAS TVEVYSPTQR SDQLILPSEL ESSNVVVSND 780
  781 SGTRKSFMSL TTPTQSEREM TDSTLVFTET NTLENLEAQT TEHSSIHQPG VQEGLTTLPG 840
  841 SPASLFMEQG SGEAAADPET TTVSSFSLNL EYEIQAKKEA AGTLSPYVET TFSTEPTGLV 900
  901 MSTVMDREVA ENISQTSREI LISERLGEPN HGAEIRGFST GFPLEEDFSG DFKEYSTVSH 960
  961 PIAKEETVMM EGSGDAAFRD TQTSPSTVLT SVHISHISDS EGPSSTMVST SAFPWEEFTS1020
 1021 SAEGSGEQLV IVSSSVDPVL PSAIGRFSGT ASSIIDEGLG EVDTVNEIDR RSTILPTAEV1080
 1081 EGTKALVEKE EVKVSGTIST NFPQTMEPAK LWSRQEVNPE RQEIESETTS EEQIQEEKSF1140
 1141 ESPQNSPATE QTIFDSQTFT ETELKTTGYS VLTTKKTYSD DKEMEEEGTS LANMSTPDPV1200
 1201 ANGMESFTTL PEATEKSHFF LATALVTESI PAEHVVTDSP IKEEESTKHF PKGMRPTIQE1260
 1261 LDTELLFSGL GSGEEVLPTL PTKSVNFTEV EQIRNTFYPH SSQVESTSSD KTEDSNRMEN1320
 1321 VAKEVGPLVS QTDIFEGNES VTSTTLIEIL SDPGAEGPTV APLPFSANIG HPQNQTLRWA1380
 1381 EEIQTSRPQT ITEQDSNKNS STAEINETTT SSTDFLARVY GFEMAKEFVT SAPKPSDMFY1440
 1441 EPSGEGSGEA DIVDSFHTSA TTQATTQESS TTFVSDGSLE KHPEVPSTKA VTADGFPTIS1500
 1501 AMLPFHSEQN KSSPDPTSTL SNTVSYERST DGSFQDHFRE FEDSTLKPNR KKPTENIIID1560
 1561 LDKEDKDLIL TITESTILEI LPELTSDKNT IIDIDHTKPV YEDILGMQTD IDPEVPSEPH1620
 1621 DSNDESNDYS TQVQETYEAA VNRSLTEETF EGSGDVLLAS YTQATHDESM TYEDRSQLDH1680
 1681 MDFNFTTGIP APSTETELDI LLPTATSLPI SRKSATVIPE TEEIKAEAKA LDDMFESSTL1740
 1741 SDGQAIADQS EIIPTLGQFE RTQEEYEDKK HAGPSFQPEF SSGVEEALVD HTPYLSIATT1800
 1801 HLVDESLTEV PNVMEGSNAP YYTDTTLAVS AFAKLSSQTP SSPLTIYSGS EASGHPEIPQ1860
 1861 PSALPGVDVG SSVMSPEDSF KEIHVNIEAT FKPSSEEYLH ITEPPSISPD TKLEPSEEDG1920
 1921 KPELLEETEA SPTEFIAVEG TEILQDFQNK TDGQVSGEAI KMFPTIKTTE AGTVITTANE1980
 1981 IKLEGATQWP HSTSASATYG IEAGVMPWLS PQTSERPTLS SSPDINPETQ AALIRGQDST2040
 2041 VAASEQQVTA RILDSNNQAT VSPVEFNTEV ATPPFSLLET SNETDFLIGI NEESVEGTAI2100
 2101 YLPGPDRCKM NPCLNGGTCY PTETSYVCTC VPGYSGDQCE LGKMTCDYGW HKFQGQCYKY2160
 2161 FAHRRTWDAA ERECRLQGAH LTSILSHEEQ TFVNRVGHDY QWIGLNDKMF EHDFRWTDGS2220
 2221 TLQYENWRPN QPDSFFSAGE DCVVIIWHEN GQWNDVPCNY HLTYTCKKGT VACGQPPVVE2280
 2281 NAKTFGKMKP RYEINSLIRY HCKDGFIQRH LPTIRCLGNG RWAIPKITCM NPSAYQRTYS2340
 2341 MKYFKNSSSA KDNSINTSKH DHRWSRRWQE TRR

YRC Informatics Platform - Version 3.0
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