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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109077850
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLININSILW MCSTLIATHA LHKVKVGKSP PLRGSLSGKV SLPCHFSTMP TLPPSYNTSE  60
   61 FLRIKWSKIE VDKNGKDLKE TTVLVAQNGN IKIGQDYKGR VSVPTHPEAV GDASLTVVKL 120
  121 LASDAGLYRC DVMYGIDDTQ DTVSLAVDGV VFHYRASTSR YTLNFEAAQK ACLDIGAVIA 180
  181 TPEQLFAAYE DGFEQCDAGW LADQTVRYPI RAPRVGCYGD MMGKAGVRTY GFRSPQETYD 240
  241 VYCYVDHLDG DVFHLTAPSK FTFEEAAKEC ENQDARLATV GELQAAWRNG FDQCDYGWLS 300
  301 DASVRHPVTV ARAQCGGGLL GVRTLYRFEN QTGFPPPDSR FDAYCFKPKE ATTIDLSILA 360
  361 ETASPSLSKE PQMVSDRTTP IIPLVDELPV IPTEFPPVGN IVDFEQKATV QPQAVTDSLA 420
  421 TKLPTPTGSS KKPWDMDDYS PSASGPLGKP DISEFKDEVL QSTTVVSHYA TDSWDGVVED 480
  481 TQTQESVTQI EQIEVGPLVT SMEILKHIPS KEFPVTETPL VTGRMTLESK TEKKTVSTVS 540
  541 ELVTTGHYGF TLGEEDDEDR TLPVGSDEST LIFDQTPEVV TVSKTSEDTT DTQLEDLETV 600
  601 LASTTVLPLI MPDNNGSSMD DWEQRETNGR ITEDFFGKYL STTPFPSQHH TEIELFPYSG 660
  661 DKILVEGIST VIYPSPQTEM THRRERTETL IPEMRTDTYT DEIQEEITKS PFMGKTEEED 720
  721 FSGMKLSTSP SEPIHVTESS VEMTKSFDFP TLTTKLSAEP TEVRDMEEEF TATPGTIKYD 780
  781 ENTTTVHLTH STLSVEAATI SKWSWDEDNI TSKPLESTEP SASSKLPPAL LTTVGMNGKD 840
  841 KEIPSFTEDG ADEFTLIPDS TQKQLEEITD EDIAVHGKFT IRFQPTTSIG IAEKSTLRDS 900
  901 ITEEKVPPIT STEGRVYATM EGSTLGEVED VDLSKSVSTV PQLAHTSEAE GLAFVSYSST 960
  961 QEPTTYVDSS HTIPLSVIPK TDWGVLVPSV PSEDEVLGEP SQDIRVIDQT HLEVTISPET1020
 1021 IRTTKLTEET TQEEFPWKEQ TAEKPVPALS STAWTPKEAV TPLDEQEGDG SAYTVSEDEL1080
 1081 LTGSESISVL ETTPVGKIDH SVSYPPGAIT EHKVKTVEVV TLTPSIGPKV SISPGPEQKY1140
 1141 ETEGSSTTGF TSSLSPFSTH VTQLMEETTA EKISLEDIDL GSGLFEKPKA TELIEFSTIK1200
 1201 ATVPSDITTA FSSVDRLHTT SALKPASAIT KKPPLIDREP GEETTSDMVI IGESTSHVPP1260
 1261 TTLEDIVAKE TETDIDREYF TTSSPPTTQP TRPPTVEDKE AFGPQALSTP QPPARTKFHP1320
 1321 DINVYIIEVR ENKTGRMSDL SVIGHPIDSE SKEDEPCSEE TDPVHDLMAE ILPEFPDIIE1380
 1381 IDLYHSEENE EEEEEECANA TDVTTTPSVQ YINGKHLVTT VPKDPEAAEA RRGQFESVAP1440
 1441 SQNFSDSSES DTRPFVIAET ELSTAVQPNG STETTESLEI TWKPETYPET SEHFSGGEPD1500
 1501 VFPTVPFHEE FESGTAIKGA ESVTERVTEV GHQAHEHIET VSLFPEESSG EIAIDQESQK1560
 1561 IAFARPTEVT FGEEVEKSTS VTYTPTVVPS SASAYVSEEK AVTLIGNLWP DDLLSTKESW1620
 1621 VEATPRQVVE LSGSSSIPVT EGSGEAEEDE DTMFTIVTDL SQRNTTDTLI TLDTSRIITE1680
 1681 SFFEVPATTI YSVSEQPSAK VVPTKFVSET DTSEWISSTS AEEEKRKEEE GTTGTASTVE1740
 1741 VYSPTQRSDQ LILPSELESS NVVVSNDSGT RKSFMSLTTP TQSEREMTDS TLVFTETNTL1800
 1801 ENLEAQTTEH SSIHQPGVQE GLTTLPGSPA SLFMEQGSGE AAADPETTTV SSFSLNLEYE1860
 1861 IQAKKEAAGT LSPYVETTFS TEPTGLVMST VMDREVAENI SQTSREILIS ERLGEPNHGA1920
 1921 EIRGFSTGFP LEEDFSGDFK EYSTVSHPIA KEETVMMEGS GDAAFRDTQT SPSTVLTSVH1980
 1981 ISHISDSEGP SSTMVSTSAF PWEEFTSSAE GSGEQLVIVS SSVDPVLPSA IGRFSGTASS2040
 2041 IIDEGLGEVD TVNEIDRRST ILPTAEVEGT KALVEKEEVK VSGTISTNFP QTMEPAKLWS2100
 2101 RQEVNPERQE IESETTSEEQ IQEEKSFESP QNSPATEQTI FDSQTFTETE LKTTGYSVLT2160
 2161 TKKTYSDDKE MEEEGTSLAN MSTPDPVANG MESFTTLPEA TEKSHFFLAT ALVTESIPAE2220
 2221 HVVTDSPIKE EESTKHFPKG MRPTIQELDT ELLFSGLGSG EEVLPTLPTK SVNFTEVEQI2280
 2281 RNTFYPHSSQ VESTSSDKTE DSNRMENVAK EVGPLVSQTD IFEGNESVTS TTLIEILSDP2340
 2341 GAEGPTVAPL PFSANIGHPQ NQTLRWAEEI QTSRPQTITE QDSNKNSSTA EINETTTSST2400
 2401 DFLARVYGFE MAKEFVTSAP KPSDMFYEPS GEGSGEADIV DSFHTSATTQ ATTQESSTTF2460
 2461 VSDGSLEKHP EVPSTKAVTA DGFPTISAML PFHSEQNKSS PDPTSTLSNT VSYERSTDGS2520
 2521 FQDHFREFED STLKPNRKKP TENIIIDLDK EDKDLILTIT ESTILEILPE LTSDKNTIID2580
 2581 IDHTKPVYED ILGMQTDIDP EVPSEPHDSN DESNDYSTQV QETYEAAVNR SLTEETFEGS2640
 2641 GDVLLASYTQ ATHDESMTYE DRSQLDHMDF NFTTGIPAPS TETELDILLP TATSLPISRK2700
 2701 SATVIPETEE IKAEAKALDD MFESSTLSDG QAIADQSEII PTLGQFERTQ EEYEDKKHAG2760
 2761 PSFQPEFSSG VEEALVDHTP YLSIATTHLV DESLTEVPNV MEGSNAPYYT DTTLAVSAFA2820
 2821 KLSSQTPSSP LTIYSGSEAS GHPEIPQPSA LPGVDVGSSV MSPEDSFKEI HVNIEATFKP2880
 2881 SSEEYLHITE PPSISPDTKL EPSEEDGKPE LLEETEASPT EFIAVEGTEI LQDFQNKTDG2940
 2941 QVSGEAIKMF PTIKTTEAGT VITTANEIKL EGATQWPHST SASATYGIEA GVMPWLSPQT3000
 3001 SERPTLSSSP DINPETQAAL IRGQDSTVAA SEQQVTARIL DSNNQATVSP VEFNTEVATP3060
 3061 PFSLLETSNE TDFLIGINEE SVEGTAIYLP GPDRCKMNPC LNGGTCYPTE TSYVCTCVPG3120
 3121 YSGDQCELDF DECHSNPCRN GATCVDGFNT FRCLCLPSYV GALCEQDTET CDYGWHKFQG3180
 3181 QCYKYFAHRR TWDAAERECR LQGAHLTSIL SHEEQTFVNR VGHDYQWIGL NDKMFEHDFR3240
 3241 WTDGSTLQYE NWRPNQPDSF FSAGEDCVVI IWHENGQWND VPCNYHLTYT CKKGTVACGQ3300
 3301 PPVVENAKTF GKMKPRYEIN SLIRYHCKDG FIQRHLPTIR CLGNGRWAIP KITCMNPSAY3360
 3361 QRTYSMKYFK NSSSAKDNSI NTSKHDHRWS RRWQETRR

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