YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109077716
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCHVIVTCRS MLWTLLSIVV AFAELIAFMS ADWLVGKARS RGGAEPAGPG GGSPEPYHPT  60
   61 LGIYARCIRN PGMQHFQRDT LCGPYAESFG EIASGFWQAT AIFLAVGIFI LCMVALVSVF 120
  121 TMCVQSIMKK SIFNVCGLLQ GIAGLFLILG LILYPAGWGC QKAIDYCGHY ASAYKPGDCS 180
  181 LGWAFYTAIG GTVLTFICAV FSAQAEIATS SDKVQEEIEE GKNLICLL

Type	Start	End	Confidence
Cytoplasmic	1	10	0.90
Transmembrane Helix	11	31	0.90
Non-Cytoplasmic	32	98	0.96
Transmembrane Helix	99	123	0.89
Cytoplasmic	124	131	0.89
Transmembrane Helix	132	154	0.90
Non-Cytoplasmic	155	181	0.92
Transmembrane Helix	182	203	0.91
Cytoplasmic	204	228	0.96