YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109075624
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGAGRGVGG GRGRGGGGRR WRAVMAAGDG DVKLGTLGSG SESSSDGGSE SPGGAGAAAE  60
   61 GGGWAAAALA LLTGGGEMLL NVALVALVLL GAYRLWVRWG RRGLGTGAGA GEESPAASLP 120
  121 RMKKRDFSLE QLRQYDGSRN PRILLAVNGK VFDVTKGSKF YGPAGPYGIF AGRDASRGLA 180
  181 TFCLDKDALR DEYDDLSDLN AVQMESVREW EMQFKEKYDY VGRLLKPGEE PSEYTDEEDT 240
  241 KDHNKQD

Type	Start	End	Confidence
Non-Cytoplasmic	1	63	0.48
Transmembrane Helix	64	97	0.76
Cytoplasmic	98	247	0.93