YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109074691
Protein type: Transmembrane
Type Confidence: 0.68
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGSGPRGAG RRRPPGGGGD TPITPASLAG CYSAPRRAPL WTCLLLCAAL RTLLASPSNE  60
   61 VNLLDSRTVM GDLGWIAFPK NGWEEIGEVD ENYAPIHTYQ VCKVMEQNQN NWLLTSWISN 120
  121 EGASRIFIEL KFTLRDCNSL PGGLGTCKET FNMYYFESDD QNGRNIKENQ YIKIDTIAAD 180
  181 ESFTELDLGD RVMKLNTEVR DVGPLSKKGF YLAFQDVGAC IALVSVRVYY KKCPSVVRHL 240
  241 AVFPDTITGA DSSQLLEVSG SCVNHSVTDE PPKMHCSAEG EWLVPIGKCM CKAGYEEKNG 300
  301 TCQVCRPGFF KASPHIQSCG KCPPHSYTHE EASTSCVCEK DYFRRESDPP TMACTRPPSA 360
  361 PRNAISNINE TSVFLEWIPP ADTGGRKDVS YYIACKKCNS HAGVCEECGG HVRYLPRQSG 420
  421 LKNTSVMMVD LLAHTNYTFE IEAVNGVSDL SPGARQYVSV NVTTNQAAPS PVTNVKKGKI 480
  481 AKNSISLSWQ EPDRPNGIIL EYEIKYFEKD QETSYTIIKS KETTITAEGL KPASVYVFQI 540
  541 RARTAAGYGV FSRRFEFETT PVADYTSSDQ SQIPIIAVSV TVGVIFVIWL ILVILLCSRR 600
  601 CGYSKAKQDP EEEKMHFHNG HIKLPGVRTY IDPHTYEDPN QAVHEFAKEI EASCITIERV 660
  661 IGAGEFGEVC SGRLKLPGKR ELPVAIKTLK VGYTEKQRRD FLGEASIMGQ FDHPNIIHLE 720
  721 GVVTKSKPVM IVTEYMENGS LDTFLKKNDG QFTVIQLVGM LRGIAAGMKY LSDMGYVHRD 780
  781 LAARNILINS NLVCKVSDFG LSRVLEDDPE AAYTTRLGGK IPIRWTAPEA IAFRKFTSAS 840
  841 DVWSYGIVMW EVVSYGERPY WEMTNQDVIK AVEEGYRLPS PMDCPAALYQ LMLDCWQKDR 900
  901 NSRPKFDEIV NMLDKLIRNP SSLKTLVNAS CRVSNLLAEH SPLGSGAYRS VGEWLEAIKM 960
  961 GRYTEIFMEN GYSSMDAVAQ VTLEDLRRLG VTLVGHQKKI MNSLQEMKVQ LVNGMVPL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle