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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109070630
Protein type: Transmembrane
Type Confidence: 0.58
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRSPIPLSS HLPTLFPRLV LFIPNPLPDV RKRLRKDGRE KQRILTSSGI LSFPGLLGRG  60
   61 SPAFSSRENR KFRSTFVLVP LPIWRYSDEG AGTRAETSRL YKDGCHIGAV ILVQSRATGL 120
  121 ILPNPGQSLS LRGFLVLSYS SDQPLGIPGS SSVSLLSARD MSWAARPPFL PQRHAAGQCG 180
  181 PVGVRKEMHC GVASRWRRRR PWLDPAAAAA AAAVAGGEQQ TPEPEPGEAG RDGMGDSGRD 240
  241 SRSPDSSSPN PLPQGVPPPS PPGPPLPPST APSLGGSGAP PPPPMPPPPL GSPFPVISSS 300
  301 MGSPGLPPPA PPGFSGPVSS PQINSTVSLP GGGSGPPEDV KPPVLGVRGL HCPPPPGGPG 360
  361 AGKRLCAICG DRSSGKHYGV YSCEGCKGFF KRTIRKDLTY SCRDNKDCTV DKRQRNRCQY 420
  421 CRYQKCLATG MKREAVQEER QRGKDKDGDG EGAGGAPEEM PVDRILEAEL AVEQKSDQGV 480
  481 EGPGGTGGSG SSPNDPVTNI CQAADKQLFT LVEWAKRIPH FSSLPLDDQV ILLRAGWNEL 540
  541 LIASFSHRSI DVRDGILLAT GLHVHRNSAH SAGVGAIFDR VLTELVSKMR DMRMDKTELG 600
  601 CLRAIILFNP DAKGLSNPSE VEVLREKVYA SLETYCKQKY PEQQGRFAKL LLRLPALRSI 660
  661 GLKCLEHLFF FKLIGDTPID TFLMEMLEAP HQLA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle