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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109069963, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.91
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMASSLAFL LLNFRVCLLL VQLLTPCSAQ FAVLGPHGPI LAMVGEDVDL PCHLFPTMSA  60
   61 ETMELRWVSS SLRQVVNVYS DGKEVEDRQS APYRGRTSIL RDGITAGKAA LRIHNVTASD 120
  121 SGKYLCYFQD GDFYEKALVE LKVAALGSDL HIEVKGYEDG GIHLECRSTG WYPQPQIQWS 180
  181 NTKGQHIPSV KAPVVADGVG LYAVAASVIM RGSSGEGVSC IIRNSLLGLE KTASISITDP 240
  241 FFRNAQPWIA ALAGTLPISL LLLAGASYFL WRQQKEKIAL SRETEREREM KEMGYAATKQ 300
  301 EISLREKLQE ELKWRKIQYM ARGEKSLAYH EWKMALFKPA DVILDPDTAN AILLVSEDQR 360
  361 SVQRAEEPRD LPDNPERFEW RYCVLGRENF TSGRHFWEVE VGDRKEWHIG VCSKNVERKK 420
  421 GWVKMTPENG YWTMGLTDGN KYRALTDPRT NLKLPEPPWK VGIFLDYETG DISFYNATDG 480
  481 SHIYTFPHTS FSEPLYPVFR ILTLEPTALT ICPTPKQVES SPDPGLVPDH SLETPVAPDL 540
  541 ANESGEPQAE ATSLLLPAHP GVDGLALHNN QSEP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle