YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109068818
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSALPGRGP AHLQRPLLGP ASHLGILRPA MTAHSFALPV IIFTTFWGLI GIAGPWFVPK  60
   61 GPNRGVIITM LVATAVCCYL FWLIAILAQL NPLFGPQLKN ETIWCPALRM PVAPLSLTTP 120
  121 SSGPSPTQLC LVSSSLPLAP RDPDLQGLPG PWKSSQSSQP AWALGSPGHS SGRGDVLLQY 180
  181 PHCSGVRRLS QGDAAGELVW AGSFPLRMGQ MPGLSPS

Type	Start	End	Confidence
Cytoplasmic	1	32	0.54
Transmembrane Helix	33	58	0.83
Non-Cytoplasmic	59	64	0.47
Transmembrane Helix	65	88	0.90
Cytoplasmic	89	217	0.47