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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109068509
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVPVGRREG DNLALPEMAR KKLQKFTTLE IVLSVLLLVL FIISIVLIVL LAKESLKSTA  60
   61 PDPGTTGTPD PGTTTSTQSR TTGPPDPGTT GTTPVSAECP VVNELERINC IPDQPPTKAT 120
  121 CDQRGCCWNP QGAVSVPWCY YSKNHSYHME GDLVNTNAGF TARLKNLPSS PVFGSNVDNV 180
  181 LLTAEYQTSN RFHFKLTDQT SSRFEVPHEH VQSFSGNAAA SLTYRVEISR EPFSIKVTRR 240
  241 SNNRVLFDSS IGPLLFANQF LQLSTRLPSA NVYGLGEHVH QQYRHDMNWK TWPIFKRDTT 300
  301 PNGNGSNLYG AQTFFLCLED ASGLSFGVFL MNSNAMEVVL QPAPAITYRT TGGILDFYVF 360
  361 LGNTPEQVVQ EYLELIGRPA LPSYWALGFH LSRYEYGTLD NMREVVERNR AAQLPYDVQH 420
  421 ADIDYMDERR DFTYDPVNFK GFPEFVNDLH KNGQKLVIIV DPAISNNSSS SKPYGPYDRG 480
  481 SDMKIWVNSS DGVTPLIGEV WPGQTVFPDY TNPNCAVWWT KEFELFHNQV EFDGIWIDMN 540
  541 EVSNFVDGSV SGCSTNNLNN PPFTPRVLDG YLFCKTLCMD AVQHWGKQYD VHNLYGYSMA 600
  601 VATAEAAKTV FPNNRSFILT RSTFAGSGKF AAHWLGDNTA TWDDLRWSIP GVLEFNLFGI 660
  661 PMVGADICGF ALDAPEELCR RWMQLGAFYP FSRNHNGQGF KDQDPASFGA DSLLLNSSRH 720
  721 YLNIRYTLLP YLYTLFFRAH SRGDTVARPL LHEFYEDNST WDVHQQFLWG PGLLITPVLD 780
  781 EGAEKVMAYV PDAVWYDYET GNQVRWRKQK VEMELPGDKI GLHLRGGYIF PTQQPNTTTL 840
  841 ASRKNPLGLI IALDENKEAK GELFWDDGET KDTVANKVYL LCEFSVTQNR LEVNISQSTY 900
  901 KDPNNLAFNE IKILGTEEPS NVTVKHNGIP TQTSPTVTYD SNLKVAIITD INLLLGEAYT 960
  961 VEWDIKIRDD EKIDCYPDEN GASAENCAAR GCIWEASNSS GVPFCYFVND LYSVSNVQYS1020
 1021 SHGATADISL KSSVYANAFP STPVNPLHLD VTYHKNEMLQ FKIYDPNNNR YEVPVPLNVP1080
 1081 TVPSSTPEGQ LYDVLIKKNP FGVEIRRKST GTIIWDSQLL GFTFNDMFIR ISTRLASKYL1140
 1141 YGFGETEHTS YRRDLEWHTW GMFSRDQPPG YKKNSYGVHP YYMGLEEDGS AHGVFLLNSN1200
 1201 AMDVTFQPLP ALTYRTTGGV LDFYVFLGPT PELVTQQYTE LIGRPVMVPY WSLGFQLCRY1260
 1261 GYQNDSEIAS LYDEMVAAQI PYDVQYSDID YMERQLDFTL SPKFAGFPAL INRMKADGMR1320
 1321 VILILDPAIS GNETQPYPAF TRGLEDDVFI KYPNDGDIVW GKVWPDFPGV VVNDSLDWDS1380
 1381 QVEVKGSHKA RLEYGQAKAA PWRTAEHFYE DLMKFPGLDM NEPSSFVNGA VSPGCRDTSL1440
 1441 NRPPYMPYLE SRDRGLSSKT LCMESQQILP DGSPVQHYNV HNLYGWSQTR PTYEAMQEVT1500
 1501 GQRGVVITRS TFPSSGRWAG HWLGDNTAAW DQLKKSIIGM MEFSLFGISY TGADICGFFQ1560
 1561 DAEYEMCVRW MQLGAFYPFS RNHNTIGTRR QDPVSWDTAF VNISRNVLQT RYTLLPYLYT1620
 1621 LIYQAHTEGV TVVRPLLHEF VSDQVTWDID SQFLLGPAFL VSPVLERNAR NVTAYFPRAR1680
 1681 WYDYYTGVDI DARGEWKTLP APLDYINLHI RGGYILPWQE PAVNTHLSRK NPLGLIIALD1740
 1741 ENKEAKGELF WDDGQTKGER CYDHVAVSKP TPVTYDPSLL LVIELWEKSQ QAQQQVTENR1800
 1801 LEVNISQSTY KDPNNLAFNE IKILGTEEPS NVTVKHNGVP SQTSPTVTYD SNLKVAIITD1860
 1861 INLLLGEAYT VEWDIKTRDD EKIDCYPDEN GASAENCIAR GCIWEASNSS GVPFCYFVND1920
 1921 LYSVSNVQYN SHGATADISL KSSVYANAFP STPVNPLRLD VTYHKNEMLQ FKIYDPNNNR1980
 1981 YEVPVPLNVP MVPSGTREGQ LYDVLIKKNP FGIEIRRRST GTIIWDSQLL GFTFNDMFIR2040
 2041 ISTRLPSKYL YGFGETEHTS YRRDLEWHTW GMFSRDQPPG YKKNSYGVHP YYMGLEEDGS2100
 2101 AHGVFLLNSN AMDVTFQPLP ALTYRTTGGV LDFYVFLGPT PELVTQQYTE 

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