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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109068371
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDAAGRGCHL LPLPAARGPA RAPAAAAAAS AASPPGLCSG AACAPSAAAG VGAMNPSSSA  60
   61 GEEKGATGGS SSSGSGAGSC CLGAEGGADP RGAGAAAAAG AAALDEPAAA GQKEKDEALE 120
  121 EKLRNLTFRK QVSYRKAISR AGLQHLAPAH PLSLPVANGP AKEPRATLDW SENAVNGEHL 180
  181 WLETNVSGDL CYLGEENCQV RFAKSALRRK CAVCKIVVHT ACIEQLEKIN FRCKPTFREG 240
  241 GSRSPRENFV RHHWVHRRRQ EGKCKQCGKG FQQKFSFHSK EIVAISCSWC KQAFHNKVTC 300
  301 FMLHHIEEPC SLGAHAAVIV PPTWIIKVKK PQNSLKASNR KKKRTSFKRK ASKRGMEQEN 360
  361 KGRPFVIKPI SSPLMKPLLV FVNPKSGGNQ GTKVLQMFMW YLNPRQVFDL SQEGPKDALE 420
  421 LYRKVPNLRI LACGGDGTVG WILSILDELQ LSPQPPVGVL PLGTGNDLAR TLNWGGGYTD 480
  481 EPVSKILCQV EDGTIVQLDR WNLHVERNPD LPPEELEDGV CKLPLNVFNN YFSLGFDAHV 540
  541 TLEFHESREA NPEKFNSRFR NKMFYAGAAF SDFLQRSSRD LSKHVKVVCD GTDLTPKIQE 600
  601 LKFQCIVFLN IPRYCAGTMP WGNPGDHHDF EPQRHDDGYI EVIGFTMASL AALQVGGHGE 660
  661 RLHQCREVML LTYKSIPMQV DGEPCRLAPA MIRISLRNQA NMVQKSKRRT SMPLLNDPQS 720
  721 VPDRLRIRVN KISLQDYEGF HYDKEKLREA SISDWLRTIA GELVQSFGAI PLGILVVRGD 780
  781 CDLETCRMYI DRLQEDLQSV SSGSQRVHYQ DHETSFPRAL SAQRLSPRWC FLDDRSQEHL 840
  841 HFVMEISQDE IFILDPDMVV SQPAGTPPGM PDLVVEQASG ISDWWNPALR KRMLSDSGLG 900
  901 MIAPYYEDSD LKDLSHSRVL QSPVSSEDHA ILQAVIAGDL MKLIESYKNG GSLLIQGPDH 960
  961 CSLLHYAAKT GNGEIVKYIL DHGPSELLDM ADSETGETAL HKAACQRNRA VCQLLVDAGA1020
 1021 SLRKTDSKGK TPQERAQQAG DPDLAAYLES CQNYKVIGHE DLETAV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle