YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109067942
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.44
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPCRGTPAV RPCLLGVRRG GVQGGGVIYP SPGDSPRDSP PGVQTGRSRR RRAVCLRFPK  60
   61 FLNHLKNSFC ILASGRGVLR GVDLPSPNSH HHFQRPPRAG ALPRCGDLVL QHAAALQPLA 120
  121 RSLGVLWGWV VGAAQGHLYT VPIREQGNIY KPNNKAMADE LSEKQVYDAH TKEIDLVNRD 180
  181 PKHLNDDVVK IDFEDVIAEP EGTHSFDGIW KASFTTFTVT KYWFYRLLSA LFGIPMALIW 240
  241 GIYFAILSFL HIWAVVPCIK SFLIEIQCIS RVYSIYVHTV CDPLFEAVGK IFSNVRINLQ 300
  301 KEI

Type	Start	End	Confidence
Cytoplasmic	1	221	0.67
Transmembrane Helix	222	255	0.71
Non-Cytoplasmic	256	303	0.44