YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109067894
Protein type:	Globular with Signal Peptide
Type Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLSALLALA SKVTLPPNYC YGMSPSGSLA DKRKNAPWSR RRPVVVEPIS DEDWYLFCGD  60
   61 TVEILEGKDA GKQGKVVQVI RQQNCVVVGG LNTYYRYIGK TMDYRGTMIP SEAPLLHRQV 120
  121 KLVDPMDRKP TEIEWRFTEA GERVRVSTRS GRIIPKPEFP RADGIVPETW IDGPKDTSVE 180
  181 DALERTYVPR LKTLQEEVME AMGIKETRKY KKVYWY

Type	Start	End	Confidence
Signal Peptide	1	22	0.83
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	216	0.99