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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109067783
Protein type: Globular with Signal Peptide
Type Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGRLSRWLL RVAFAAHLRP DQSAGYVAVR PTPRSRSQAL GFLKCFLGAL KMEMTEMTGV  60
   61 SLKRGALVVE DNDSGVPAEE TKKQKLSECS LTKGQVGLQN DFLSISEDVP GPPDTVSTGK 120
  121 GGKNSEAQLE DEEEEEEDGL SEECEEEESE SFADMMKHGL TEADVGITKF VSSHQGFSGI 180
  181 LKERYSDFVV HEIGKDGRIS HLNDLSIPVD EEDPSEDIFT VLTAEEKQRL EELQLFKNKE 240
  241 TSVAIEVIED TKEKRTVIHQ AIKSLFPGLE TKTEDREGKK YIVAYHAAGK KALAKVRTAA 300
  301 DPRKHSWPKS RGSYCHFVLY KENKDTMDAI NVLSRYLRVK PNIFSYMGTK DKRAITVQEI 360
  361 AVLKITAQRL AHLNKCLMNF KLGNFSYQKN PLKLGELQGN HFTVVLRNIT GTDDQVQQAM 420
  421 NSLREIGFIN YYGMQRFGTT AVPTYQVGRA ILQNSWTEVM DLILKPRSGA EKGYLVKCRE 480
  481 EWAKTKDPAA ALRKLPVKRC VEGQLLRGLS KYGMKNIVSA FGIIPRNNRL MYIHSYQSYV 540
  541 WNNMVSKRIE DYGLKPVPGD LVLKGATASY IEEDDVNNYS IHDVVMPLPG FDVIYPKHKI 600
  601 QEAYREMLTA DNLDIDNMRH KIRDYSLSGA YRKIIIRPQN VSWEVVAYDD PKIPLFNTDV 660
  661 DNLEGKPPPV FASEGKYRAL KMDFSLPPST YATMAIREVL KMDTSIKNQT QLNTTWLR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle