YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109067205
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGRLYAPPY AKCVLLPLLW PATVPDVTSV NALSELRKAR VPRVTTSRNR VPPPALAQAF  60
   61 GGFRTLAPQG RGSGRSPVLA PALRLQSRKA TAEETPVTVL APPPPSLPLG TTRRHGANAL 120
  121 ARWWCIRCCT RPGGPVLRSP PFLAGHRAGS CGKEWRGSGG GLAADLARGR RRQLVGGLFG 180
  181 PRGGRELWRR SPYFETKRIF PPLPHQRSGG GAPSPSRHAG LGRDLGLREG GAWSRVREAW 240
  241 RRAADCPEVA AAVPLTWPPR GEFETSLQKM GKKQNGKSKK VEEAEPEEFV VEKVLDRRVV 300
  301 NGKVEYFLKW KGFTDADNTW EPEENLDCPE LIEAFLNSQK AGKEKDGTKR KSLSDSESDD 360
  361 SKSKKKRDAA DKPRGFARGL DPERIIGATD SSGELMFLMK WKDSDEADLV LAKEANMKCP 420
  421 QIVIAFYEER LTWHSCPEDE AQ

Type	Start	End	Confidence
Signal Peptide	1	32	0.85
N-region	1	23
H-region	24	29
C-region	30	32
Cleavage Site	32	33
Non-Cytoplasmic	33	442	0.99