YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109067551
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLIGIALVTL GAAIALSKTA TWHANNSDLP TTCRRTNGVT SARDPRPEVS LFHFRFSSQL  60
   61 RTPEAEVKAV YSGWMHFRGQ LFSSLSRGMQ SLSLRQTSTS KGLNYLTIMA PRNLWHMRSN 120
  121 FLFGSRCWMT RFSAEIIFKS VSFRLFGVKC HNADSEPSEN EDLLNNLLTM GVDVDMARKR 180
  181 QPGVFHRMIT NEQDLKTFLL SKGASKEVIA SIISRYPRAI TRTPENLSKR WDLWRNIVTS 240
  241 DLEIVNILER SPESFFRSNN NLNLENNIKF LYSVGLTRKC LCRLLTNAPR TFSNSLDLNK 300
  301 QMVDFLQATC LSLGHNDPTD FVRKIIFKNP FILIQSTKRV KANIEFLQST FNLNSEELLV 360
  361 LICGPGAEIL DLSNDYARRS YTNIKKKLFS LECTEEEVQK FVLSYPDVIF LAEKKFNDKI 420
  421 DCLLEENVSI SQIIENPRVL DSSISTLKSR IRELVNAGCN LSTLNISLLS WSKKRYEAKL 480
  481 KKLSRLA

Type	Start	End	Confidence
Signal Peptide	1	19	0.95
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	487	0.99