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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109066776
Protein type: Transmembrane
Type Confidence: 0.78
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGVASPGSL TVAPTAQPAE SLFPRVLREP RGLGLALAGV IPEPGLLLLL WRGDFQRAAA  60
   61 PGGAFFRMGW CRWLLYPPRS HYWGQERRWP GPQVGGLTLA PEPGFSWAAV NCPLSQPPAG 120
  121 RSTSLAVLRE GSKQRGSEGD VQGSGGMHRR RASSPRAGKA SSTWAFLSGI LAPPTVGTSF 180
  181 ILQLSLSLEF LRLFQKDLLW RTCGGRELCL LLRRQCLARV GSITRKTWMG NFDLRNSQGS 240
  241 YTQHLSSQVA FTPLSREEAE PPAIKEVPEQ MQFAAHRNID LGSHRSTSSS YFLPLPQPTV 300
  301 PLQLPGAGHT PGAGMRPVSK SRAFLTPGPC TPGPSCECLP GAWHCACHLG ALKLGQELLR 360
  361 RPGFVGGAFS VVRRCVKLCT GHEYAAKIIN TKKLSARDHQ KLEREARICR LLKHSNIVRL 420
  421 HDSISEEGFH YLVFDLRRKG GVFVHVCAHL RDSHSEAERS HCIQQILEAV LHCHQMGVVH 480
  481 RDLKPENLLL ASKCKGAAVK LADFGLAIEV QGDQQAWFGF AGTPGYLSPE VLRKEAYGKP 540
  541 VDIWACGVIL YILLVGYPPF WDEDQHKLYQ QIKAGAYDFP SPEWDTVTPE AKNLINQMLT 600
  601 INPAKRITAH EALKHPWVCQ RSTVASMMHR QETVECLKKF NARRKLKGAI LTTMLATRNF 660
  661 SVGRQTTAPA TMSTAASGTT MGLVEQAKSL LNKKADGVKP QTNSTKNSAA ATSPKGTLPP 720
  721 AALEPQTTVI HNPVDGIKES SDSANTTIED EDAKAPRVPD ILSSVRRGSG APEAEGPLPC 780
  781 PSPAPFSPLP APTPRISDIL NSVRRGSGTP EAEGPLSAGP LPCLSPALLG PLPSPSPRIS 840
  841 DILNSVRRGS GTPEAEGPSP VGPLPCPSPT IPGPLPTPSR KQEIIKTTEQ LIEAVNNGDF 900
  901 EAYAKICDPG LTSFEPEALG NLVEGMDFHR FYFENLLAKN SKPIHTTILN PHVHVIGEDA 960
  961 ACIAYIRLTQ YIDGQGRPRT SQSEETRVWH RRDGKWQNVH FHCSGAPVAP LQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle