YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109066680
Protein type:	Globular with Signal Peptide
Type Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRARTMSILL ITKSSVPSTV PANIFVKTHQ QKHVQKSSPP QTSVRSGKTN AANGRESHSA  60
   61 CNRFTLLANF AVLLSGPPPL LAGDIFIGFR LLGVQSHWFA FLFVRFGCLV KGGEGVTIGL 120
  121 EAPPPRAVCK NKQPLDKRAL AAAARGGHGV LSGSGGGGRC CESGGGGAGR QREGARPSGG 180
  181 RVGAENMAGG KAGKDSGKAK AKAVSRSQRA GLQFPVGRIH RHLKTRTTSH GRVGATAAVY 240
  241 SAAILEYLTA EVLELAGNAS KDLKVKRITP RHLQLAIRGD EELDSLIKAT IAGGGVIPHI 300
  301 HKSLIGKKGQ QKTA

Type	Start	End	Confidence
Signal Peptide	1	22	0.69
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	314	0.88