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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109066224
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MINMGDSHVD TSSTVSEAVA EEVSLFSMTD VILFSVIVGL LTYWFLFRKK KEEVPEFTKI  60
   61 QTLTSSVRES SFVEKMKKTG RNIIVFYGSQ TGTAEEFANR LSKDAHRYGM RGMSADPEEY 120
  121 DLADLSSLPE IDNALVVFCM ATYGEGDPTD NAQDFYDWLQ ETDVDLSGVK FAVFGLGNKT 180
  181 YEHFNAMGKY VDKRLEQLGA QRIFELGLGD DDGNLEEDFI TWREQFWPAV CEHFGVEATG 240
  241 EESSIRQYEL VVHTDIDAAK VYVGEMGRLK SYENQKPPFD AKNPFLAAVT TNRKLNQGTE 300
  301 RHLMHLELDI SDSKIRYESG DHVAVYPAND SALVNQLGKI LGADLDVVMS LNNLDEESNK 360
  361 KHPFPCPTSY RTALTYYLDI TNPPRTNVLY ELAQYASEPS EQELLRKMAS SSGEGKELYL 420
  421 SWVVEARRHI LAILQDCPSL RPPIDHLCEL LPRLQARYYS IASSSKVHPN SVHICAVVVE 480
  481 YETKAGRINK GVATNWLRAK EPAGENGGRA LVPMFVRKSQ FRLPFKATTP VIMVGPGTGV 540
  541 APFIGFIQER AWLRQQGKEV GETLLYYGCR RSDEDYLYRE ELAQFHRDGA LTQLNVAFSR 600
  601 EQSHKVYVQH LLKRDREHLW KLIEGGAHIY VCGDARNMAR DVQNTFYDIV AELGAMEHAQ 660
  661 AVDYVKKLMT KGRYSLDVWS 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle