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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109065029, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLQGPCSVLL LWGILGATQA QQQEVISPDT MERNNNCPEK TDCPIHVYFV LDTSESVTMQ  60
   61 SPTDILLFHM KQFVPQFISQ LQNEFYLDQV ALSWRYGGLH FSDQVEVFSP PGSDRASFIK 120
  121 SLQGISSFRR GTFTDCALAN MTEQIRQHGT KGTVHFAVVI TDGHVTGSPC GGIKLQAERA 180
  181 REEGIRLFAV APNRNLKEQG LRDIASTPHE LYRNDYATML PDSTEIDQDT INRIIKVMKH 240
  241 EAYGECYRVS CLEIPGPPGP KGYRGQKSLR GLQGAKQSPG QGTAAGDPGI EGPIGFPGPK 300
  301 GVPGFKGEKG EFGADGRKGA PGLAGKNGTD GQKGKLGRIG PPGCKGDPGN RGPDGYPGEA 360
  361 GSPGERGDQG GKGDPGRPGR RGPPGDIGAK GSKGYQGNNG APGSPGVKGA KGGPGPRGPK 420
  421 GEPGRRGDPG TKGSPGSDGP KGEKGDPGPE GPRGLAGEVG NKGAKGDRGL PGPRGPQGAL 480
  481 GEPGNQGSRG DPGDAGPRGD SGQPGPKGDP GRPGFSYPGP RGAPGDKGEP GPRGPEGGRG 540
  541 DFGLKGEPGR KGEKGEPADP SPPGSPPPKD PRGVPGPEGE PGPPGDPGLT ECDVMTYVRE 600
  601 TCGCCDCEKR CGALDVVFVI DSSESIGYTN FTLEKNFVIN VVNRLGAIAK DPKSETGTRV 660
  661 GVVQYSHEGT FEAIQLDDER IDSLSSFKEA VKNLEWIAGG TWTPSALKFA YDRLIKESRR 720
  721 QKTRVFAVVI TDGRHDPRDD DLNLRALCDR DVTVTAIGIG DMFHEKHESE NLYSIACDKP 780
  781 QQVRNMTLFS DLVAEKFIDD MEDVLCPDPQ IVCPDLPCQT ELSVAQCTQR PVDIVFLLDG 840
  841 SERLGEQNFH KARRFVEQVA RRLTLARRDD DPLNARVALL QFGGPGEQQV AFPLSHNLTA 900
  901 IHEALEAAQY LNSFSHVGAG VVHAINAIVL NARGGARRNA ELSFVFLTDG VTGNDSLHES 960
  961 AHSMRKQNVV PTVVAVGGDV DMDVLTTLSL GDRAAVFREK DYDSLAQPGF FDRFIRWIC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle