YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109049061
Protein type:	Globular with Signal Peptide
Type Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSRIPVVLL ACGSFNPITN MHLRLFEVAR DHLHQTGMYQ VIQGIISPVN DNYGKKDLAA  60
   61 SHHRVAMARL ALQTSDWIRV DPWESEQTQW METVKVLRHH HSELLRSPPQ MEGPDHGKAL 120
  121 SPTPAAVPEL KLLCGADVLK TFQTPNLWKD AHIQEIVEKF GLVCVGRAGH DPKGYISESP 180
  181 ILRMHQHNIH LAKEPVQNEI SATHVRRALG QGQSVKYLIP DAVITYIKDH GLYTKDSAWK 240
  241 GKSTQSAEGK TS

Type	Start	End	Confidence
Signal Peptide	1	21	0.71
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	252	0.99