YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109048759
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPFAAAAAA MSMLRLQKRL ASSVLRCGKK KVWLDPNETN EIANANSRQQ IRKLIKDGLI  60
   61 IRKPVMVHSR AQCRKNTLAR RKGRHMGIGK RKGTANAQMP EKVTWMRRMR ILRRLLRRYR 120
  121 ESKKIDRHMY HSLYLKVKGN VFKNKPILMG HIHKLKADKA RKKLLADQAE ARRSKTKEAC 180
  181 KRREERLQAK KEEIIKTLSK EEETKK

Type	Start	End	Confidence
Signal Peptide	1	21	0.89
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	206	0.99