YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109043049
Protein type:	Transmembrane
Type Confidence:	0.84
Topology Confidence:	0.45
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIIYSSVNGH LKRLLFKAIS RILAATSGPG LSLSSRPRRC GVEVVLLSAT LGGRFRFSGR  60
   61 HTHQDTALLA RSSWVFVFLH RLSARFSSFL SARALGAKAL LAWNSCKAST VVAVGLTIAA 120
  121 AGFAGRYVLQ AMKHMEPQVK QVFQSLPKSA FSGGYYRGGF EPKMTKREAA LILGVSPTAN 180
  181 KGKIRDAHRR IMLLNHPDKG GSPYIAAKIN EAKDLLEGQA KK

Type	Start	End	Confidence
Cytoplasmic	1	76	0.59
Transmembrane Helix	77	97	0.45
Non-Cytoplasmic	98	107	0.61
Transmembrane Helix	108	129	0.72
Cytoplasmic	130	222	0.62