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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109041778
Protein type: Transmembrane
Type Confidence: 0.63
Topology Confidence: 0.27
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSLNQGCQR EPKFEAMSPF CTQTFWEPRL TALFSFTSGL HPLCLSFSSS RLAANSRIQE  60
   61 MWGSEKDPVW PRLLEATEEL DKTARPESAR EFSCPAPGPA LLQHYPAPWL TGLSVACKLE 120
  121 AEDAGAKGPR RSQAEGALCC LSHTLAVVLG LTVAGCLTQA QSLPGSVCHQ RLPLFCLRRT 180
  181 PPVPLLHGTR QCPLPRPPSV MTPSRTGGWS FRTRSPSHGL WGRMLMRVPP ASARPEPLAR 240
  241 SADPLSARIT PDLAHSCDPS SRAAQPWASP NLPHVPGLHH SSAAPGPLCG PSGCQDRFWA 300
  301 APTSAHHFPP HSRPRPLGSL AGTPLAQHLR PALPAPPRGK YPSSGPLPRS CLHAMPPRPL 360
  361 DSHTSPFRIL PPAGPRGPPR IPPLPSPHPS ASDSSPHLSH PRPLTSLILP GLPDTPHFYL 420
  421 PSPRAVCYTP SPSPHSTAPG PRARRRPLPP STHPLSAPLP SPPPGEQFMS KSRIFWMIAE 480
  481 GEKQQLGLEG TSQCNVSLKK QRSRSILSSF FCCFRDYNVE APPPNSPSVL PPLVEENGGL 540
  541 QKGDQRQVIP IPSPPAKYLL PEVTVLDYGK KCVVIDLDET LVHSSFKPIS NADFIVPVEI 600
  601 DGTIHQVYVL KRPHVDEFLQ RMGQLFECVL FTASLAKYAD PVADLLDRWG VFRARLFRES 660
  661 CVFHRGNYVK DLSRLGRELS KVIIVDNSPA SYIFHPENAV PVQSWFDDMT DTELLDLIPF 720
  721 FEGLSREDDV YSMLHRLCNR 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle