YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109039977
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQLPPQGAE GDKWALKRGR GSDHSTALPG PSPRQPRQPD LPQKKLVAPD LTMTRCALLV  60
   61 LMVLMFGRVL VVPVTPIPTF QLRPQNSPQT TPGPAPAASE SPSAAPTWPW AAQSHRSPTR 120
  121 HSGSRIVLSL DVSIGLLQIL LEQARARAAR EQATTNARIL ARVGRR

Type	Start	End	Confidence
Cytoplasmic	1	53	0.92
Transmembrane Helix	54	77	0.80
Non-Cytoplasmic	78	166	0.87