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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109035924, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLPWELLIL QSFMLCLADD STLHGPIFIQ EPSPVMFPLD SEEKKVKLNC EVKGNPKPHI  60
   61 RWKLNGTDVD IGMDFRYSVV EGSLLINNPN KTQDAGTYQC TATNSFGTIV SREAKLQFAY 120
  121 LDNFKTRTRS TVSVRRGQGM VLLCGPPPHS GELSYAWIFN EYPSYQDNRR FVSQETGNLY 180
  181 IAKVEKSDVG NYTCVVTNTV TNHKVLGPPT PLILRNDGVM GEYEPKIEVQ FPETVPTAKG 240
  241 ATVKLECFAL GNPVPTIIWR RADGKPIARK ARRHKSNGIL EIPNFQQEDA GLYECVAENS 300
  301 RGKNVARGQL TFYAQPNWIQ KINDIHVAME ENVFWECKAN GRPKPTYRWL KNGEPLLTRD 360
  361 RIQIEQGTLN ITIVNLSDAG MYQCLAENKH GVIFSNAELS VIAVGPDFSR TLLKRITLVK 420
  421 VGGEVVIECK PKASPKPVYT WKKGRDILKE NERITISEDG NLRIINVTKS DAGSYTCIAT 480
  481 NHFGTASSTG NLVVKDPTRV MVPPSSMDVT VGESIVLPCQ VTHDHSLDIV FTWSFNGHLI 540
  541 DFDRDGDHFE RVGGQDSAGD LMIRNIQLKH AGKYVCMVQT SVDRLSAAAD LIVRGPPGPP 600
  601 EAVTIDEITD TTAQLSWRPG PDNHSPITMY VIQARTPFSV GWQAVNTVPE LIDGKTFTAT 660
  661 VVGLNPWVEY EFRTVAANVI GIGEPSRPSE KRRTEEALPE VTPANVSGGG GSKSELVITW 720
  721 ETVPEELQNG RGFGYVVAFR PYGKMIWMLT VLASADASRY VFRNESVRPF SPFEVKVGVF 780
  781 NNKGEGPFSP TTVVYSAEEE PTKPPASIFA RSLSATDIEV FWASPLEKNR GRIQGYEVKY 840
  841 WRHEDKEENA RKIRTVGNQT STKITNLKGS ALYHLAVKAY NSAGTGPSSA TVNVTTRKPP 900
  901 INVRWNSSDS KIILNWDQVK ALDNESEVKG YKVLYRWNRQ SSTSVIETNK TSVELSLPFD 960
  961 EDYIIEIKPF SDGGDGSSSE QIRIPKISNA YARGSGASTS NACTLSAIST IMISLTARSS1020
 1021 L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle