YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109032942
Protein type:	Transmembrane
Type Confidence:	0.82
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGNSGCPFF LWGLLALLGL ALVISLIFNI SHYVEKQRQD KMYSYSNDHI PRDDEYYIED  60
   61 APIYGNLDDM ISEPMDENCY EQMKARPEKS VNERHEATPS AQATNETQMC YASLDHSIKG 120
  121 KRRKPRKQNS HFSDKDGHEQ LHAIDASVSK TTLVDSFSPE SQAVEENIHD DPIRLFGLIR 180
  181 AKREPIN

Type	Start	End	Confidence
Non-Cytoplasmic	1	8	0.50
Transmembrane Helix	9	32	0.74
Cytoplasmic	33	187	0.52