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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109019665
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVSELQKAA LVKSMLDTQR DLLQALSHSL EPRKDKEEGK KSTRDRDTHG DCGSGQFKRQ  60
   61 AFGVGPATHR EHVWLTSKGS VYLLEARQEA GRGPWNHPST TGFVLTRLFN DSQMHLFLFS 120
  121 MVVLVYILAM AGNATMVLLI WADAQLHKPM YFLLSQLSFL DIFFSSVTVP KMIVAFLFDW 180
  181 TSISFGGCGA QMFFFMFLGA AECLLLALMA YDRYVAICNP LRYPVLMSRR VCLLMVVSSW 240
  241 LGGSLNASIQ TSLTLQFPYC GSRKVTHFFC EVPSLLMLAC ADTEAYKQVL FVTGVVVLLV 300
  301 PIAFITTSYA FILVAVLQMR SVEGRQKALA TCSSHLTVVN LFYGPLVYTY MLPASYHSPG 360
  361 QDDVVSVFYT VLTPLLNPVI YSLRNKEVTG AMKKVIGELK AKDIPAPPSS PNRRNCGNSP 420
  421 PGFLQSREPG ATGISLAKAP RGREEREVRT NGAGQSDCRG RRMRSAVRPS PSGPPGVRYL 480
  481 FTKPHRPEAA AAGAAPPAGP QRLWKGADRP EAPWADKSRL GRASESQAPP EAEFPARPTQ 540
  541 HPGRCEGRSH PAAERPLAWR EAARGLGVPP AGNGAHWLLS SRESDGAGRS LSHAPLGRRR 600
  601 APLGLQPRFP ALLHSILCVL PPVTFTFSWE IMMSDLEEKD VDEFSSSGFK CLTCFAVQGR 660
  661 KCDPELKWCA ADKTKCIEFS GIINTGIRDV AVEMKRCIQA DLCKETITSY MGFPIANKSR 720
  721 NCKSAIRNGA RIRPPSPIFF VLFLGRVLH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle