YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109019396
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKLKKVLSG QDTEDRSGLS EVVEASSLSW GTRIKGFIAC FAIGILCSLL GTLLLWVPRK  60
   61 GLHLFAVFYT FGNIASIGST IFLMGPVKQL KRMFEPTRLI ATIMVLLCFA LTLCSAFWWH 120
  121 NKGLALIFCI LQSLALTWYS LSFIPFARDA VKKCFAVCLA

Type	Start	End	Confidence
Cytoplasmic	1	35	0.98
Transmembrane Helix	36	57	0.94
Non-Cytoplasmic	58	64	0.81
Transmembrane Helix	65	85	0.95
Cytoplasmic	86	98	0.83
Transmembrane Helix	99	119	0.94
Non-Cytoplasmic	120	123	0.86
Transmembrane Helix	124	146	0.88
Cytoplasmic	147	160	0.96