YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109019387, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAAGARGLR ATYHRLLDKV ELMLPEKLRP LYNHPAGPRT VFFWAPIMKW GLVCAGLADM  60
   61 ARPAEKLSTA QSAVLMATGF IWSRYSLVII PKNWSLFAVN FFVGTAGASQ LFRIWRYNQE 120
  121 LKAKAHK

Type	Start	End	Confidence
Cytoplasmic	1	66	0.54
Transmembrane Helix	67	88	0.80
Non-Cytoplasmic	89	95	0.71
Transmembrane Helix	96	115	0.92
Cytoplasmic	116	127	0.87