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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109019273
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTRWSRTSA GVGASDPVGS WWSQTTRPFS LPPASNSQRL IALREPRNCP KTAEIRVVYS  60
   61 NGLLFRWIRG PGGATWLLLA GGGRRCSGAG TRLIRYLRVV VSAAPRMGRC GRDSGPLPSL 120
  121 LLLLLLLLAV PGAGAAPRSA LYSPSDPLTL LQADTVRGAV LGSRGAWAVE FFASWCGHCI 180
  181 AFAPTWKALA EDVKAWRPAL NLAALDCAEE TNSAVCRDFN IPGFPTVRFF KAFSKNGSGA 240
  241 VFPVAGADMQ TLRERLIDAL ESHHDTWPPA CPPLEPAKLE EIDGFFARNK EEYLALIFEK 300
  301 GGSYLGREVA LDLSQHKGVV VRRVLNTEAD VVRKFGVTDF PSCYLLFRNG SVSRVPVLME 360
  361 SRSFYTAYLQ RLSGLTREAA QTTVAPTTAN KIAPTVWKFA DRSKIYMADL ESALHYILRI 420
  421 EVGRFPVLEG QRLVALKKFV AVLAKYFPGR PLVQNFLHSV NEWLKRQKRN KIPYSFFKTV 480
  481 LDDRKEGAVL AKKVNWIGCQ GSEPHFRGFP CSLWVLFHFL TVQAARQNVD HSQEAAKAQE 540
  541 VLPAIRGYVH YFFGCRDCAG HFEKMAAASM HRVGSPNAAV LWLWSSHNRV NARLAGAPSE 600
  601 DPQFPKVQWP PRELCSACHN ERLDVPVWDV EATLNFLKAH FSPSNIILDF PAAGSAARRD 660
  661 AQNVAAAPEL AMGALELEGR NSTLDPGKPE MMKSPANTTP DVPAERPEAS RPPKLRPGLG 720
  721 AAPGQEPPEH MAELQRNERE QPRGQWHLSK RDTGAALLAE SRAEKNRLWG PSEVRRVGRS 780
  781 SKQLVDIPEG QLEARAGRGR GQWLQVLGGG FSHLDISLCV GLYSLSFMGL LAMYTYFRAK 840
  841 IRALKGHAGH PAA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle