YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109018521
Protein type:	Globular with Signal Peptide
Type Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRPAGTRRQG WRLPTAATLA PSSRLPPCGP PRSALAPASA RCSRLRVGGG SSGAWAGGAP  60
   61 YRARAPHRPA GDQALGFLQR PGSGGRPWTK AGTAAPPSGY SWEMCSGCAL GWARDPGTSK 120
  121 ALGTPSCLPI YRVTGRFSFR RVVLGCFYRR HKCRLLMFDI LNFICCFLPN ILARLCLPLL 180
  181 SELCNALKDN KKKDAGKLAK KDKDPVNKSR DKAKKKKWSK GKVQDKLNNI VLFDKATYNK 240
  241 LCKEVPNYKL ITPAVVSERL KIQGSLARAA LQELLSKGFI KLVSKHRAQV IYTRNTKGGD 300
  301 APAVGEDARI GPTNCSFGKI KLY

Type	Start	End	Confidence
Signal Peptide	1	24	0.52
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	323	0.89