YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109017986
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVGPKPQGL VGRKRGALCL LVSRLVLTVS APAEVRRRVL RPVRSWMDRE TLALADRHFR  60
   61 GLGCGVPGVG QAPGRVAFVS EPGAFSYADF VRGFLLPNLP CVFSSAFTQG WGSRRRWVTP 120
  121 AGRPDFDHLL RTYGDVVVPV ANCGVQEYNS NPKEHMPLRD YITYWKEYIE GGYSSPRGCL 180
  181 YLKDWHLCRD FPVEDVFTLP VYFSSDWLNE FWDALDVDDY RFVYAGPAGS WSPFHADIFR 240
  241 SFSWSVNVCG RKKWLLFPPG QEEALRDRHG NLPYDVTSPA LCDTHLHPRS QLAGPPLEIT 300
  301 QEAGEMVFVP SGWHHQVHNL DDTISINHNW VNGFNLANMW RFLQQELCAV QEEVSEWRDS 360
  361 MPDWHHHCQV IMRSCSGINF EEFYHFLKVI AEKRLLVLRE AAAEDGAGLG FEQAAFDAGR 420
  421 ITEVLASLVA HPSFQRVDTS AFSLRPKELL QQLREAVDAA VAP

Type	Start	End	Confidence
Signal Peptide	1	33	0.98
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	463	0.99