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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109017747
Protein type: Transmembrane
Type Confidence: 0.89
Topology Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPQASEHRLG RTREPPVNIQ PRVGSKLPFA PRARSKERRN PASGPNPMLR PLPPRPGPPD  60
   61 ERLKKLELGR GRTSGPRPRG PLRADHGVPL PGSPPPTVAL PLPSRTNLAR SKSVSSGDLR 120
  121 PMGIALGGHR GTGELGAALS RLALRPEPPT LRRSTSLRRL GGFPGPPTLF SIRTEPPASH 180
  181 GSFHMISARS SEPFYSDDKM AHHTLLLGSG HVGLRNLGNT CFLNAVLQCL SSTRPLRDFC 240
  241 LRRDFRQEVP GGGRAQELTE AFADVIGALW HPDSCEAVNP TRFRAVFQKY VPSFSGYSQQ 300
  301 DAQEFLKLLM ERLHLEINRR GRRAPPILAN GPVPSPPRRG GALLEEPELS DDDRANLMWK 360
  361 RYLEREDSKI VDLFVGQLKS CLKCQACGYR STTFEVFCDL SLPIPKKGFA GGKVSLRDCF 420
  421 NLFTKEEELE SENAPVCDRC RQKTRSTKKL TVQRFPRILV LHILIFRFLL LLGYLPYILF 480
  481 PHPPCFQRIE FSLGKACHTL FHKLLPVFWE WGEDSFQDRS PPQRPTASQM LLNQGLDLNR 540
  541 FSASRGSIKK SSVGVDFPLQ RLSLGDFASD KAGSPVYQLY ALCNHSGSVH YGHYTALCRC 600
  601 QTGWHVYNDS RVSPVSENQV ASSEGYVLFY QLMQEPPRCL 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle