YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109016494
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLDQAPTLP DARVSPEAPQ ALVLGPSGVR TFGFALPCHR GGSRSTWVES PRLLRRGRRG  60
   61 SPEGSQALTG SGGSAAWVCP GEVFSFGARH LGRTPGLRPP PPAPRGAGSG NVPTPAGTRG 120
  121 RTAVGGGWGW VGVRGQGRRR SEPGTPRHPS TVTGVGVAAG PGAEGWGPGS APGRRGSRSA 180
  181 TARPALASRP RPASRPLGCS RPFFPGWARA QLDWARRAAA AAAGGGGRAR AGAGRRAGGR 240
  241 VRRGAGSQAS GPRSSHPSRR ITRSSGPGPA GSAAEMLQTL YDYFWWERLW LPVNLTWADL 300
  301 EDRDGRVYAK ASDLYITLPL ALLFLIVRYF FELYVATPLA ALLNIKEKTR LRAPPNATLE 360
  361 HFYLTSGKQP KQVEVELLSR QSGLSGRQVE RWFRRRRNQD RPSLLKKFRE ASWRFTFYLI 420
  421 AFIAGMAVIV DKPWFYDMKK VWEGYPIQST VPSQYWYYMI ELSFYWSLLF SIASDVKRKD 480
  481 FKEQIIHHVA TIILISFSWF ANYIRAGTLI MALHDSSDYL LESAKMFNYA GWKNTCNNIF 540
  541 IIFAIVFIIT RLVILPFWIL HCTLVYPLEL YPAFFGYYFF NSMMGVLQLL HIFWAYLILR 600
  601 MAHKFITGKV VEDERSDREE TESSEGEEAA AGGGAKSRPL ANGHPILNNH HRPLEVEKGS 660
  661 CLLAPHWKGS SGPEPLFLST RSWGE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle