YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109016435
Protein type:	Transmembrane
Type Confidence:	0.75
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGNIASYCS YLAALRVLYQ LYVSIVTPAG LPSSIKGSWF VSEKATFGVV VFNFIWLFCF  60
   61 LQDTQEKEGI LPERAEEAKL KAKYPSLGQK PGGSDFLMKR LQKGQKYFDS GDYNMAKAKM 120
  121 KNKQLPSAGP DKNLVTGDHI PTPQDLPQRK SSLVTSKLAG GQVE

Type	Start	End	Confidence
Cytoplasmic	1	11	0.55
Transmembrane Helix	12	31	0.51
Non-Cytoplasmic	32	44	0.60
Transmembrane Helix	45	61	0.65
Cytoplasmic	62	164	0.52