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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|212276113, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASASSGPSS SVGFSSFDPA VPSCTSSSAA SGIKRPVAPE VPYASGMPIK KIGHRSVDSS  60
   61 GETTYKKTTS SALKGAIQLG ITHTVGSLST KPERDVLMQD FYVVESIFFP SEGSNLTPAH 120
  121 HYNDFRFKTY APVAFRYFRE LFGIRPDDYL YSLCSEPLIE LCSSGASGSL FYVSSDDEFI 180
  181 IKTVQHKEAE FLQKLLPGYY MNLNQNPRTL LPKFYGLYCV QAGGKNIRIV VMNNLLPRSV 240
  241 KMHIKYDLKG STYKRRASQK EREKPLPTFK DLDFLQDIPD GLFLDADMYN ALCKTLQRDC 300
  301 LVLQSFKIMD YSLLMSIHNI DHAQREPLSS ETQYSVDTRR PAPQKALYST AMESIQGEAR 360
  361 RGGTMETDDH MGGIPARNSK GERLLLYIGI IDILQSYRFV KKLEHSWKAL VHDGDTVSVH 420
  421 RPGFYAERFQ RFMCNTVFKK IPLKPSPSKK FRSGSSFSRR VGSSGNSCIT YQPSVSGEHK 480
  481 AQVTTKAEVE PGVHLGRPDV LPQTPPLEEI SEGSPIPDPS FSPIVGETLQ MLTTSTTLEK 540
  541 LEVAESEFTH 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle