YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109016152
Protein type: Globular with Signal Peptide
Type Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASASSGPSS SVGFSSFDPA VPSCTSSSAA SGIKRPVAPE VPYASGMPIK KIGHRSVDSS  60
   61 GETTSSALKG AIQLGITHTV GSLSTKPERD VLMQDFYVVE SIFFPSEGSN LTPAHHYNDF 120
  121 RFKTYAPVAF RYFRELFGIR PDDYLYSLCS EPLIELCSSG ASGSLFYVSS DDEFIIKTVQ 180
  181 HKEAEFLQKL LPGYYMNLNQ NPRTLLPKFY GLYCVQAGGK NIRIVVMNNL LPRSVKMHIK 240
  241 YDLKGSTYKR RASQKEREKP LPTFKDLDFL QDIPDGLFLD ADMYNALCKT LQRDCLVLQS 300
  301 FKIMDYSLLM SIHNIDHAQR EPLSSETQYS VDTRRPAPQK ALYSTAMESI QGEARRGGTM 360
  361 ETDDHMGGIP ARNSKGERLL LYIGIIDILQ SYRFVKKLEH SWKALVHDGD TVSVHRPGFY 420
  421 AERFQRFMCN TVFKKIPLKP SPSKKFRSGS SFSRRVGSSG NSCITYQPSV SGEHKAQVTT 480
  481 KAEVEPGVHL GRPDVLPQTP PLEEISEGSP IPDPSFSPIV GETLQMLTTS VDNSEYMRNG 540
  541 DFLPTRLQAQ QDAVNIVCHS KTRSNPENNV GLITLANDCE VLTTLTPDTG RILSKLHTVQ 600
  601 PKGKITFCTG IRVAHLALKH RQGKNHKMRI IAFVGSPVED NEKDLVKLAK RLKKEKVNVD 660
  661 IINFGEEEVN TEKLTAFVNT LNGKDGTGSH LVTVPPGPSL ADALISSPIL AGEGGAMLGL 720
  721 GASDFEFGVD PSADPELALA LRVSMEEQRQ RQEEEARRAA AASAAEAGIA TTGTEDSDDA 780
  781 LLKMTISQQE FGRTGLPDLS SMTEEEQIAY AMQMSLQGAE FGQAESADID ASSAMDTSEP 840
  841 AKEEDDYDVM QDPEFLQSVL KNLPGVDPNN EAIRNAMGSL ASQATKDGKK DKKEEDKK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle